Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05443579_101638 | Not Available | Positive | 719616 - 720140 | 19617.2 |
| trap transporter, dctm subunit | SAMN05443579_101639 | Not Available | Positive | 720137 - 721438 | 45729.2 |
| 4-hydroxybenzoyl-coa thioesterase | SAMN05443579_101640 | Not Available | Positive | 721462 - 721878 | 15721.8 |
| alkaline phosphatase d | SAMN05443579_101641 | Not Available | Positive | 721928 - 723841 | 69499.8 |
| hypothetical protein | SAMN05443579_101642 | Not Available | Negative | 723989 - 724339 | 12219.5 |
| protein-tyrosine phosphatase | SAMN05443579_101643 | Not Available | Negative | 724447 - 724920 | 17075.4 |
| addiction module antidote protein, higa family | SAMN05443579_101644 | Not Available | Positive | 725150 - 725443 | 10609.7 |
| hypothetical protein | SAMN05443579_101645 | Not Available | Positive | 725855 - 726073 | 8240.82 |
| hypothetical protein | SAMN05443579_101646 | Not Available | Positive | 726344 - 727120 | 28738.1 |
| mg2+-importing atpase | SAMN05443579_101647 | Not Available | Positive | 727210 - 729942 | 99426.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
