Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside abc transporter membrane protein | SAMN05443579_101618 | Not Available | Negative | 693059 - 694204 | 40171.2 |
| nucleoside abc transporter atp-binding protein | SAMN05443579_101619 | Not Available | Negative | 694197 - 695738 | 54889.6 |
| putative mfs transporter, agza family, xanthine/uracil permease | SAMN05443579_101620 | Not Available | Negative | 695887 - 697188 | 45534.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05443579_101621 | Not Available | Negative | 697330 - 698307 | 36198.0 |
| xanthine dehydrogenase, molybdenum binding subunit apoprotein | SAMN05443579_101622 | Not Available | Negative | 698501 - 700951 | 87658.7 |
| xanthine dehydrogenase small subunit | SAMN05443579_101623 | Not Available | Negative | 700956 - 702608 | 59200.8 |
| uncharacterized conserved protein ygbk, duf1537 family | SAMN05443579_101624 | Not Available | Negative | 702811 - 704109 | 44469.5 |
| ribulose-bisphosphate carboxylase large chain | SAMN05443579_101625 | Not Available | Negative | 704106 - 705395 | 45349.1 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN05443579_101626 | Not Available | Negative | 705395 - 705934 | 20378.0 |
| trap transporter, dctm subunit | SAMN05443579_101627 | Not Available | Negative | 705966 - 707867 | 66609.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
