Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-homoserine-lactone acylase | SAMN05443579_101598 | Not Available | Negative | 673270 - 675819 | 89967.9 |
| transcriptional regulator, arac family | SAMN05443579_101599 | Not Available | Negative | 675950 - 676765 | 29405.3 |
| dna-binding transcriptional regulator, lysr family | SAMN05443579_101600 | Not Available | Negative | 676885 - 677835 | 33991.1 |
| sugar phosphate permease | SAMN05443579_101601 | Not Available | Positive | 677920 - 679239 | 44784.5 |
| adenosine deaminase | SAMN05443579_101602 | Not Available | Negative | 679194 - 680264 | 39454.9 |
| transcriptional regulator, iclr family | SAMN05443579_101603 | Not Available | Negative | 680360 - 681184 | 29769.8 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05443579_101604 | Not Available | Positive | 681362 - 682141 | 27548.7 |
| amino acid abc transporter membrane protein, paat family | SAMN05443579_101605 | Not Available | Positive | 682156 - 682824 | 24164.4 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05443579_101606 | Not Available | Positive | 682821 - 683567 | 27071.0 |
| glycine/d-amino acid oxidase | SAMN05443579_101607 | Not Available | Positive | 683564 - 684856 | 45186.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
