Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein, steroid delta-isomerase-related | SAMN05443579_101588 | Not Available | Negative | 662480 - 662881 | 14371.7 |
| transcriptional regulator, gntr family | SAMN05443579_101589 | Not Available | Positive | 663031 - 664569 | 56882.1 |
| superfamily ii dna and rna helicase | SAMN05443579_101590 | Not Available | Negative | 664633 - 666096 | 53390.7 |
| hypothetical protein | SAMN05443579_101591 | Not Available | Negative | 666250 - 667137 | 31387.8 |
| dctp deaminase | SAMN05443579_101592 | Not Available | Negative | 667273 - 667839 | 21305.3 |
| guanine deaminase | SAMN05443579_101593 | Not Available | Negative | 667908 - 669194 | 46714.4 |
| transcriptional regulator, badm/rrf2 family | SAMN05443579_101594 | Not Available | Negative | 669360 - 669896 | 19086.1 |
| nucleoside-binding protein | SAMN05443579_101595 | Not Available | Negative | 670161 - 671270 | 40459.4 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05443579_101596 | Not Available | Negative | 671345 - 671737 | 14275.1 |
| predicted arabinose efflux permease, mfs family | SAMN05443579_101597 | Not Available | Positive | 671893 - 673119 | 42527.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
