Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfonate transport system substrate-binding protein | SAMN05443579_101558 | Not Available | Positive | 629574 - 630587 | 36183.0 |
| alkanesulfonate monooxygenase | SAMN05443579_101559 | Not Available | Positive | 630635 - 631759 | 41279.3 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN05443579_101560 | Not Available | Positive | 631910 - 632731 | 29842.2 |
| nitt/taut family transport system substrate-binding protein | SAMN05443579_101561 | Not Available | Positive | 632757 - 633758 | 35597.6 |
| sulfonate transport system substrate-binding protein | SAMN05443579_101562 | Not Available | Positive | 633772 - 634749 | 34126.9 |
| para-nitrobenzyl esterase | SAMN05443579_101563 | Not Available | Negative | 634760 - 636493 | 60774.1 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN05443579_101564 | Not Available | Negative | 636625 - 638118 | 53969.3 |
| protein n-acetyltransferase, rimj/riml family | SAMN05443579_101565 | Not Available | Positive | 638222 - 638959 | 27227.4 |
| dna-binding transcriptional regulator, lysr family | SAMN05443579_101566 | Not Available | Negative | 638966 - 639883 | 33048.1 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN05443579_101567 | Not Available | Positive | 640025 - 641587 | 56461.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
