Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| steroid 5-alpha reductase family enzyme | SAMN05443579_101548 | Not Available | Negative | 618440 - 619246 | 29364.1 |
| cyclopropane-fatty-acyl-phospholipid synthase | SAMN05443579_101549 | Not Available | Negative | 619257 - 620300 | 40506.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05443579_101550 | Not Available | Positive | 620483 - 621508 | 37237.7 |
| taurine transport system permease protein | SAMN05443579_101551 | Not Available | Negative | 621426 - 622304 | 32152.4 |
| taurine transport system atp-binding protein | SAMN05443579_101552 | Not Available | Negative | 622297 - 623085 | 28669.8 |
| taurine transport system substrate-binding protein | SAMN05443579_101553 | Not Available | Negative | 623112 - 624128 | 36093.4 |
| rhodanese-related sulfurtransferase | SAMN05443579_101554 | Not Available | Negative | 624952 - 626601 | 59349.3 |
| predicted metal-dependent enzyme of the double-stranded beta helix superfamily | SAMN05443579_101555 | Not Available | Negative | 626598 - 627230 | 22927.0 |
| sulfonate transport system substrate-binding protein | SAMN05443579_101556 | Not Available | Negative | 627227 - 628207 | 34745.5 |
| acyl-coa dehydrogenase | SAMN05443579_101557 | Not Available | Negative | 628204 - 629439 | 43302.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
