Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetoin utilization deacetylase acuc | SAMN05443579_101538 | Not Available | Positive | 608784 - 609902 | 40095.2 |
| cyclohexyl-isocyanide hydratase | SAMN05443579_101539 | Not Available | Negative | 609939 - 610619 | 23945.1 |
| hypothetical protein | SAMN05443579_101540 | Not Available | Negative | 610616 - 610969 | 12592.8 |
| transcriptional regulator, arac family | SAMN05443579_101541 | Not Available | Positive | 611181 - 612113 | 33748.0 |
| glutamate/aspartate transport system substrate-binding protein | SAMN05443579_101542 | Not Available | Negative | 612092 - 612994 | 31847.6 |
| 2,2-dialkylglycine decarboxylase (pyruvate) | SAMN05443579_101543 | Not Available | Negative | 613011 - 614345 | 48274.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05443579_101544 | Not Available | Positive | 614521 - 615420 | 32656.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05443579_101545 | Not Available | Negative | 615428 - 616309 | 31594.6 |
| hippurate hydrolase | SAMN05443579_101546 | Not Available | Positive | 616454 - 617800 | 46944.9 |
| hypothetical protein | SAMN05443579_101547 | Not Available | Negative | 617781 - 618443 | 24005.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
