Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase | SAMN05443579_101528 | Not Available | Negative | 598560 - 598949 | 14320.2 |
| nad(p)h-dependent fmn reductase | SAMN05443579_101529 | Not Available | Negative | 598971 - 599561 | 21668.8 |
| regulatory protein, luxr family | SAMN05443579_101530 | Not Available | Negative | 599646 - 600740 | 40687.9 |
| hypothetical protein | SAMN05443579_101531 | Not Available | Negative | 600881 - 601276 | 13850.5 |
| hypothetical protein | SAMN05443579_101532 | Not Available | Negative | 601288 - 602952 | 56644.4 |
| hypothetical protein | SAMN05443579_101533 | Not Available | Positive | 603272 - 604147 | 30952.7 |
| protein of unknown function | SAMN05443579_101534 | Not Available | Negative | 604158 - 604646 | 16986.2 |
| transcriptional regulator, iclr family | SAMN05443579_101535 | Not Available | Negative | 604740 - 605552 | 28564.8 |
| choline dehydrogenase | SAMN05443579_101536 | Not Available | Positive | 605648 - 607297 | 59433.6 |
| mfs transporter, mhs family, metabolite:h+ symporter | SAMN05443579_101537 | Not Available | Positive | 607374 - 608693 | 47485.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
