Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobaltochelatase cobs subunit | SAMN05443579_101518 | Not Available | Positive | 586422 - 587396 | 36139.4 |
| cobaltochelatase cobt | SAMN05443579_101519 | Not Available | Positive | 587409 - 589136 | 64372.6 |
| transcriptional regulator, iclr family | SAMN05443579_101520 | Not Available | Positive | 589277 - 590068 | 28050.8 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05443579_101521 | Not Available | Positive | 590065 - 591057 | 34532.8 |
| sulfoacetaldehyde dehydrogenase | SAMN05443579_101522 | Not Available | Positive | 591107 - 592555 | 50944.6 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05443579_101523 | Not Available | Positive | 592558 - 594075 | 53517.5 |
| hypothetical protein | SAMN05443579_101524 | Not Available | Positive | 594072 - 594866 | 27374.8 |
| uncharacterized conserved protein, duf2252 family | SAMN05443579_101525 | Not Available | Negative | 594829 - 596067 | 45568.8 |
| butyryl-coa dehydrogenase/hypothetical protein | SAMN05443579_101526 | Not Available | Negative | 596150 - 597397 | 43978.1 |
| arac-type dna-binding protein | SAMN05443579_101527 | Not Available | Positive | 597572 - 598573 | 36133.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
