Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconolactonase | SAMN05443579_101508 | Not Available | Positive | 573148 - 574077 | 32486.5 |
| para-nitrobenzyl esterase | SAMN05443579_101509 | Not Available | Positive | 574263 - 575771 | 52562.4 |
| arac-type dna-binding protein | SAMN05443579_101510 | Not Available | Negative | 575840 - 576595 | 28235.7 |
| dmso reductase anchor subunit | SAMN05443579_101511 | Not Available | Negative | 576702 - 577634 | 33682.2 |
| fe-s-cluster-containing dehydrogenase component | SAMN05443579_101512 | Not Available | Negative | 577640 - 578419 | 27975.1 |
| molydopterin dinucleotide binding domain-containing protein | SAMN05443579_101513 | Not Available | Negative | 578416 - 581355 | 108800.0 |
| dna-binding transcriptional regulator, lysr family | SAMN05443579_101514 | Not Available | Positive | 581389 - 582378 | 35488.6 |
| acetate kinase | SAMN05443579_101515 | Not Available | Negative | 582375 - 583565 | 41338.3 |
| sulfoacetaldehyde acetyltransferase | SAMN05443579_101516 | Not Available | Negative | 583582 - 585393 | 65514.0 |
| transcriptional regulator, iclr family | SAMN05443579_101517 | Not Available | Positive | 585578 - 586399 | 29527.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
