Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05443579_101497 | Not Available | Positive | 565714 - 566550 | 30393.5 |
| Trna-asn | Not Available | Not Available | Positive | 566557 - 566633 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 566643 - 566719 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 566812 - 566888 | Not Available |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05443579_101502 | Not Available | Negative | 567424 - 568257 | 30342.9 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05443579_101503 | Not Available | Negative | 568263 - 569186 | 33811.5 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN05443579_101504 | Not Available | Negative | 569221 - 570495 | 45865.3 |
| transcriptional regulator, laci family | SAMN05443579_101505 | Not Available | Positive | 570631 - 571674 | 36827.3 |
| phosphate acetyltransferase | SAMN05443579_101506 | Not Available | Positive | 571692 - 572648 | 32494.8 |
| putative acetyltransferase | SAMN05443579_101507 | Not Available | Positive | 572658 - 573116 | 16493.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
