Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n6-l-threonylcarbamoyladenine synthase | SAMN05443579_10137 | Not Available | Negative | 35411 - 36463 | 36566.5 |
| antar domain-containing protein | SAMN05443579_10138 | Not Available | Positive | 36544 - 37836 | 47582.0 |
| nitrate/nitrite transport system substrate-binding protein | SAMN05443579_10139 | Not Available | Positive | 38176 - 39420 | 45412.7 |
| nitrate/nitrite transport system permease protein | SAMN05443579_10140 | Not Available | Positive | 39431 - 40348 | 32905.1 |
| nitrate/nitrite transport system atp-binding protein | SAMN05443579_10141 | Not Available | Positive | 40345 - 41154 | 29106.6 |
| nitrite reductase | SAMN05443579_10142 | Not Available | Positive | 41245 - 42498 | 45407.1 |
| assimilatory nitrate reductase (nadh) alpha subunit apoprotein | SAMN05443579_10143 | Not Available | Positive | 42495 - 45272 | 99602.7 |
| anthranilate phosphoribosyltransferase | SAMN05443579_10144 | Not Available | Positive | 45360 - 46265 | 32029.0 |
| uroporphyrin-iii c-methyltransferase | SAMN05443579_10145 | Not Available | Positive | 46262 - 47074 | 27716.6 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN05443579_10146 | Not Available | Positive | 47168 - 48271 | 38777.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
