Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05443579_101457 | Not Available | Positive | 527768 - 528415 | 22954.6 |
| hypothetical protein | SAMN05443579_101458 | Not Available | Positive | 528545 - 528868 | 11216.2 |
| argininosuccinate synthase | SAMN05443579_101459 | Not Available | Positive | 528889 - 530235 | 49652.2 |
| hypothetical protein | SAMN05443579_101460 | Not Available | Negative | 530309 - 531142 | 29728.5 |
| udp-n-acetylmuramate dehydrogenase | SAMN05443579_101461 | Not Available | Negative | 531162 - 532220 | 38442.9 |
| hypothetical protein | SAMN05443579_101462 | Not Available | Positive | 532266 - 532751 | 17815.6 |
| aspartyl protease family protein | SAMN05443579_101463 | Not Available | Positive | 532762 - 533412 | 22708.5 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05443579_101464 | Not Available | Negative | 533426 - 533779 | 12623.2 |
| acyl-phosphate glycerol-3-phosphate acyltransferase | SAMN05443579_101465 | Not Available | Negative | 533789 - 534469 | 23969.6 |
| cys-trna(pro) deacylase | SAMN05443579_101466 | Not Available | Negative | 534531 - 535025 | 17863.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
