Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl transferase domain-containing protein | SAMN05443579_101437 | Not Available | Negative | 500995 - 508080 | 253517.0 |
| amino acid adenylation domain-containing protein | SAMN05443579_101438 | Not Available | Negative | 508080 - 513362 | 189297.0 |
| surfactin synthase thioesterase subunit | SAMN05443579_101439 | Not Available | Negative | 513417 - 514103 | 25420.5 |
| mbth protein | SAMN05443579_101440 | Not Available | Negative | 514162 - 514401 | 9017.57 |
| transmembrane sensor | SAMN05443579_101441 | Not Available | Negative | 514590 - 514823 | 8672.15 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05443579_101442 | Not Available | Negative | 514858 - 515382 | 19295.2 |
| hypothetical protein | SAMN05443579_101443 | Not Available | Positive | 515601 - 516437 | 30149.5 |
| lipid-binding sylf domain-containing protein | SAMN05443579_101444 | Not Available | Negative | 516460 - 517044 | 19665.3 |
| short-chain dehydrogenase | SAMN05443579_101445 | Not Available | Negative | 517161 - 517922 | 26489.6 |
| arac-type dna-binding protein | SAMN05443579_101446 | Not Available | Positive | 518022 - 518918 | 32049.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
