Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05443579_101407 | Not Available | Negative | 434111 - 434914 | 26574.3 |
| transcriptional regulator, tetr family | SAMN05443579_101408 | Not Available | Positive | 435128 - 435811 | 25865.8 |
| lysr family transcriptional regulator, nitrogen assimilation regulatory protein | SAMN05443579_101409 | Not Available | Negative | 435813 - 436775 | 34026.1 |
| feruloyl esterase | SAMN05443579_101410 | Not Available | Negative | 436868 - 438490 | 56254.4 |
| d-lactate dehydrogenase (cytochrome) | SAMN05443579_101411 | Not Available | Negative | 438526 - 439941 | 49867.3 |
| d-galactonate transporter | SAMN05443579_101412 | Not Available | Negative | 440015 - 441331 | 47114.4 |
| luciferase-type oxidoreductase, ba3436 family | SAMN05443579_101413 | Not Available | Positive | 441541 - 442497 | 34633.6 |
| glutamate carboxypeptidase | SAMN05443579_101414 | Not Available | Negative | 442501 - 443754 | 43641.6 |
| transcriptional regulator, iclr family | SAMN05443579_101415 | Not Available | Negative | 443869 - 444735 | 30280.8 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05443579_101416 | Not Available | Positive | 444907 - 445884 | 33674.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
