Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase, cu-zn family | SAMN05443579_101377 | Not Available | Positive | 403604 - 404146 | 17912.1 |
| molybdenum cofactor cytidylyltransferase | SAMN05443579_101378 | Not Available | Negative | 404156 - 404740 | 19416.3 |
| pyridoxamine 5'-phosphate oxidase | SAMN05443579_101379 | Not Available | Positive | 404773 - 405426 | 24750.1 |
| outer membrane protein ompa | SAMN05443579_101380 | Not Available | Negative | 405431 - 406639 | 43445.9 |
| hypothetical protein | SAMN05443579_101381 | Not Available | Negative | 406639 - 407010 | 13005.8 |
| hypothetical protein | SAMN05443579_101382 | Not Available | Negative | 407176 - 408126 | 33626.7 |
| iron complex outermembrane recepter protein | SAMN05443579_101383 | Not Available | Negative | 408194 - 410293 | 75056.8 |
| hypothetical protein | SAMN05443579_101384 | Not Available | Negative | 410372 - 410782 | 14641.7 |
| outer membrane receptor for ferrienterochelin and colicins | SAMN05443579_101385 | Not Available | Negative | 410782 - 412971 | 78236.0 |
| hypothetical protein | SAMN05443579_101386 | Not Available | Negative | 413053 - 413451 | 13746.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
