Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron(iii) transport system atp-binding protein | SAMN05443579_101367 | Not Available | Positive | 393809 - 394495 | 24724.0 |
| glutathione s-transferase | SAMN05443579_101368 | Not Available | Positive | 394593 - 395288 | 26029.3 |
| lactoylglutathione lyase | SAMN05443579_101369 | Not Available | Positive | 395351 - 395764 | 14864.7 |
| uncharacterized conserved protein, duf1697 family | SAMN05443579_101370 | Not Available | Positive | 395771 - 396379 | 22124.7 |
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN05443579_101371 | Not Available | Positive | 396489 - 398675 | 74661.0 |
| 2-haloacid dehalogenase | SAMN05443579_101372 | Not Available | Negative | 398736 - 399467 | 26367.6 |
| 2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolase | SAMN05443579_101373 | Not Available | Negative | 399475 - 400122 | 22209.0 |
| 6-phosphogluconate dehydratase | SAMN05443579_101374 | Not Available | Negative | 400113 - 401951 | 64491.5 |
| outer membrane protein ompa | SAMN05443579_101375 | Not Available | Negative | 402174 - 402728 | 18753.4 |
| cation transport protein chac | SAMN05443579_101376 | Not Available | Positive | 402798 - 403607 | 29228.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
