Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05443579_101357 | Not Available | Positive | 383885 - 384199 | 12229.2 |
| short-chain dehydrogenase | SAMN05443579_101358 | Not Available | Negative | 384263 - 384970 | 23990.5 |
| putative efflux protein, mate family | SAMN05443579_101359 | Not Available | Negative | 385005 - 386420 | 49087.5 |
| sugar phosphate permease | SAMN05443579_101360 | Not Available | Negative | 386449 - 387783 | 46985.5 |
| transcriptional regulator, marr family | SAMN05443579_101361 | Not Available | Negative | 387895 - 388350 | 16509.8 |
| uncharacterized domain 1-containing protein | SAMN05443579_101362 | Not Available | Positive | 388407 - 388955 | 19330.5 |
| n-acetyl-gamma-glutamyl-phosphate reductase | SAMN05443579_101363 | Not Available | Negative | 388983 - 389912 | 32480.8 |
| dna-binding transcriptional regulator, lysr family | SAMN05443579_101364 | Not Available | Positive | 389995 - 390894 | 32069.9 |
| iron(iii) transport system substrate-binding protein | SAMN05443579_101365 | Not Available | Positive | 391019 - 392065 | 37134.6 |
| iron(iii) transport system permease protein | SAMN05443579_101366 | Not Available | Positive | 392103 - 393812 | 59724.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
