Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN05443579_101287 | Not Available | Positive | 317416 - 318726 | 46228.6 |
| protein of unknown function | SAMN05443579_101288 | Not Available | Positive | 318765 - 319874 | 39943.1 |
| enoyl-coa hydratase | SAMN05443579_101289 | Not Available | Negative | 319890 - 320687 | 28298.9 |
| hypothetical protein | SAMN05443579_101290 | Not Available | Negative | 320737 - 321168 | 15784.0 |
| uncharacterized conserved protein, duf2164 family | SAMN05443579_101291 | Not Available | Negative | 322064 - 322336 | 10572.5 |
| hypothetical protein | SAMN05443579_101292 | Not Available | Positive | 322455 - 322673 | 7872.96 |
| hypothetical protein | SAMN05443579_101293 | Not Available | Negative | 322686 - 323582 | 30591.1 |
| hypothetical protein | SAMN05443579_101294 | Not Available | Negative | 323725 - 324408 | 24685.0 |
| acetyltransferase (gnat) family protein | SAMN05443579_101295 | Not Available | Negative | 324410 - 324898 | 18167.7 |
| hypothetical protein | SAMN05443579_101296 | Not Available | Positive | 325016 - 325165 | 5224.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
