Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase subunit i | SAMN05443579_10117 | Not Available | Negative | 16625 - 17143 | 19476.3 |
| nadh dehydrogenase subunit h | SAMN05443579_10118 | Not Available | Negative | 17161 - 18237 | 39770.1 |
| nadh dehydrogenase subunit g | SAMN05443579_10119 | Not Available | Negative | 18234 - 20411 | 77032.2 |
| nadh dehydrogenase subunit f | SAMN05443579_10120 | Not Available | Negative | 20427 - 21767 | 48404.0 |
| nadh dehydrogenase subunit e | SAMN05443579_10121 | Not Available | Negative | 21767 - 22306 | 19439.3 |
| nadh dehydrogenase subunit d | SAMN05443579_10122 | Not Available | Negative | 22317 - 23570 | 47602.8 |
| nadh dehydrogenase subunit c | SAMN05443579_10123 | Not Available | Negative | 23572 - 24183 | 23024.2 |
| nadh dehydrogenase subunit b | SAMN05443579_10124 | Not Available | Negative | 24196 - 24675 | 17596.5 |
| nadh dehydrogenase subunit a | SAMN05443579_10125 | Not Available | Negative | 24688 - 25047 | 13389.6 |
| Trna-leu | Not Available | Not Available | Positive | 25111 - 25195 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
