Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superfamily i dna or rna helicase | SAMN05443579_101207 | Not Available | Positive | 230924 - 232828 | 69980.3 |
| uncharacterized conserved protein, duf736 family | SAMN05443579_101208 | Not Available | Negative | 233154 - 233459 | 11152.1 |
| hypothetical protein | SAMN05443579_101209 | Not Available | Positive | 233675 - 233881 | 6935.34 |
| predicted thioesterase | SAMN05443579_101210 | Not Available | Negative | 234030 - 234479 | 16615.9 |
| parb family protein | SAMN05443579_101211 | Not Available | Negative | 234685 - 236727 | 73477.1 |
| protein of unknown function | SAMN05443579_101212 | Not Available | Negative | 236830 - 237657 | 30865.7 |
| hypothetical protein | SAMN05443579_101213 | Not Available | Negative | 238224 - 238613 | 14269.1 |
| hypothetical protein | SAMN05443579_101214 | Not Available | Positive | 239001 - 240302 | 48568.3 |
| hypothetical protein | SAMN05443579_101215 | Not Available | Negative | 240598 - 241044 | 16461.9 |
| aaa domain-containing protein | SAMN05443579_101216 | Not Available | Negative | 241065 - 242942 | 69449.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
