Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05443579_101197 | Not Available | Negative | 223110 - 223700 | 21604.9 |
| plasmid segregation centromere-binding protein parg | SAMN05443579_101198 | Not Available | Negative | 223697 - 223960 | 9693.75 |
| plasmid segregation oscillating atpase parf | SAMN05443579_101199 | Not Available | Negative | 223957 - 224598 | 22606.3 |
| plasmid replication initiator protein | SAMN05443579_101200 | Not Available | Negative | 224888 - 225769 | 33272.0 |
| helix-turn-helix domain-containing protein | SAMN05443579_101201 | Not Available | Negative | 225791 - 226111 | 11682.8 |
| hypothetical protein | SAMN05443579_101202 | Not Available | Negative | 226212 - 227021 | 29525.0 |
| protein of unknown function | SAMN05443579_101203 | Not Available | Negative | 227210 - 227557 | 12798.1 |
| hypothetical protein | SAMN05443579_101204 | Not Available | Positive | 227891 - 228076 | 6533.04 |
| protein of unknown function | SAMN05443579_101205 | Not Available | Negative | 228254 - 228469 | 7779.14 |
| putative atp-dependent endonuclease of the old family | SAMN05443579_101206 | Not Available | Positive | 228936 - 230927 | 71982.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
