Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, marr family | SAMN05443579_1017 | Not Available | Negative | 6649 - 7185 | 19849.5 |
| atp-binding cassette, subfamily b | SAMN05443579_1018 | Not Available | Positive | 7205 - 9055 | 65433.6 |
| hypothetical protein | SAMN05443579_1019 | Not Available | Negative | 9115 - 9579 | 16701.9 |
| adp-ribose pyrophosphatase | SAMN05443579_10110 | Not Available | Negative | 9588 - 10187 | 21994.0 |
| protein of unknown function | SAMN05443579_10111 | Not Available | Negative | 10219 - 10521 | 11161.0 |
| nadh dehydrogenase subunit n | SAMN05443579_10112 | Not Available | Negative | 10549 - 12036 | 52647.3 |
| nadh dehydrogenase subunit m | SAMN05443579_10113 | Not Available | Negative | 12061 - 13539 | 53840.4 |
| nadh dehydrogenase subunit l | SAMN05443579_10114 | Not Available | Negative | 13567 - 15564 | 73720.2 |
| nadh dehydrogenase subunit k | SAMN05443579_10115 | Not Available | Negative | 15625 - 15933 | 11141.2 |
| nadh dehydrogenase subunit j | SAMN05443579_10116 | Not Available | Negative | 15930 - 16589 | 23806.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
