Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vanillate o-demethylase ferredoxin subunit | SAMN05443579_101177 | Not Available | Negative | 200652 - 201626 | 35223.6 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN05443579_101178 | Not Available | Negative | 201850 - 203505 | 60415.3 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05443579_101179 | Not Available | Positive | 203772 - 204722 | 33216.6 |
| vanillate o-demethylase monooxygenase subunit | SAMN05443579_101180 | Not Available | Positive | 204830 - 205792 | 35726.0 |
| dna-binding transcriptional regulator, lysr family | SAMN05443579_101181 | Not Available | Positive | 205943 - 206842 | 32554.7 |
| 3-oxoadipate coa-transferase beta subunit | SAMN05443579_101182 | Not Available | Negative | 207615 - 208274 | 23138.0 |
| 3-oxoacid coa-transferase, a subunit | SAMN05443579_101183 | Not Available | Negative | 208271 - 208765 | 17913.6 |
| outer membrane protein (porin) | SAMN05443579_101184 | Not Available | Negative | 209162 - 210262 | 38322.5 |
| hypothetical protein | SAMN05443579_101185 | Not Available | Negative | 210593 - 210733 | 4964.04 |
| transcriptional regulator, laci family | SAMN05443579_101186 | Not Available | Negative | 211415 - 212467 | 37338.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
