Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein trbl | SAMN05443579_101167 | Not Available | Negative | 190286 - 191656 | 44916.4 |
| hypothetical protein | SAMN05443579_101168 | Not Available | Negative | 191661 - 191936 | 9727.74 |
| p-type conjugative transfer protein trbj | SAMN05443579_101169 | Not Available | Negative | 191950 - 192678 | 26626.6 |
| type iv secretion system protein virb4 | SAMN05443579_101170 | Not Available | Negative | 192675 - 195113 | 89523.6 |
| type iv secretion system protein virb3 | SAMN05443579_101171 | Not Available | Negative | 195124 - 195402 | 9977.34 |
| type iv secretion system protein virb2 | SAMN05443579_101172 | Not Available | Negative | 195399 - 195758 | 12427.5 |
| type iv secretion system protein virb11 | SAMN05443579_101173 | Not Available | Negative | 195755 - 196792 | 36653.6 |
| hypothetical protein | SAMN05443579_101174 | Not Available | Negative | 196789 - 197295 | 18756.1 |
| type iv secretion system protein vird4 | SAMN05443579_101175 | Not Available | Negative | 197292 - 199325 | 73571.2 |
| hypothetical protein | SAMN05443579_101176 | Not Available | Negative | 199607 - 199897 | 10558.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
