Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative pd-(d/e)xk family member | SAMN05443579_101157 | Not Available | Negative | 177566 - 178531 | 35037.4 |
| z1 domain-containing protein | SAMN05443579_101158 | Not Available | Negative | 178524 - 181175 | 98957.0 |
| hypothetical protein | SAMN05443579_101159 | Not Available | Negative | 181172 - 182299 | 42495.4 |
| dna (cytosine-5)-methyltransferase 1 | SAMN05443579_101160 | Not Available | Negative | 183230 - 184855 | 60916.9 |
| hypothetical protein | SAMN05443579_101161 | Not Available | Negative | 184864 - 185766 | 33495.9 |
| iclr helix-turn-helix domain-containing protein | SAMN05443579_101162 | Not Available | Negative | 185766 - 186845 | 39803.6 |
| hypothetical protein | SAMN05443579_101163 | Not Available | Negative | 187001 - 187279 | 10028.1 |
| type iv secretion system protein virb10 | SAMN05443579_101164 | Not Available | Negative | 187276 - 188541 | 44131.1 |
| type iv secretion system protein virb9 | SAMN05443579_101165 | Not Available | Negative | 188538 - 189569 | 36985.3 |
| type iv secretion system protein virb5 | SAMN05443579_101166 | Not Available | Negative | 189566 - 190273 | 26262.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
