Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fur family transcriptional regulator, ferric uptake regulator | SAMN05443579_101147 | Not Available | Negative | 166589 - 167059 | 16867.8 |
| dna-binding transcriptional regulator, padr family | SAMN05443579_101148 | Not Available | Positive | 167241 - 167816 | 20748.7 |
| nadph-dependent ferric siderophore reductase, contains fad-binding and sip domains | SAMN05443579_101149 | Not Available | Positive | 167830 - 168657 | 30401.1 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN05443579_101150 | Not Available | Negative | 168680 - 170209 | 54593.0 |
| transcriptional regulator, marr family | SAMN05443579_101151 | Not Available | Negative | 170206 - 170682 | 17057.8 |
| magnesium transporter | SAMN05443579_101152 | Not Available | Negative | 170734 - 171711 | 36282.7 |
| hypothetical protein | SAMN05443579_101153 | Not Available | Positive | 172590 - 173636 | 39288.2 |
| hnh endonuclease | SAMN05443579_101154 | Not Available | Negative | 173765 - 174634 | 33696.3 |
| hypothetical protein | SAMN05443579_101155 | Not Available | Negative | 174692 - 175390 | 25856.9 |
| aipr protein | SAMN05443579_101156 | Not Available | Negative | 175497 - 177566 | 77789.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
