Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05443579_101127 | Not Available | Negative | 133566 - 133676 | 4262.58 |
| filamentous hemagglutinin | SAMN05443579_101128 | Not Available | Negative | 133720 - 145230 | 379437.0 |
| enoyl-coa hydratase/carnithine racemase | SAMN05443579_101129 | Not Available | Negative | 145468 - 146265 | 28631.7 |
| acyl-coa dehydrogenase | SAMN05443579_101130 | Not Available | Negative | 146292 - 147317 | 35859.9 |
| acyl-coa dehydrogenase | SAMN05443579_101131 | Not Available | Negative | 147346 - 148509 | 41521.9 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05443579_101132 | Not Available | Negative | 148506 - 149756 | 44295.2 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05443579_101133 | Not Available | Negative | 149758 - 150765 | 35442.9 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05443579_101134 | Not Available | Negative | 150779 - 151789 | 34948.2 |
| acyl dehydratase | SAMN05443579_101135 | Not Available | Negative | 151873 - 152379 | 18317.3 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05443579_101136 | Not Available | Negative | 152399 - 153592 | 43002.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
