Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfonate transport system substrate-binding protein | SAMN05443579_102187 | Not Available | Positive | 1403777 - 1404814 | 37064.8 |
| sulfonate transport system substrate-binding protein | SAMN05443579_102188 | Not Available | Positive | 1404853 - 1405809 | 33732.9 |
| alkanesulfonate monooxygenase | SAMN05443579_102189 | Not Available | Positive | 1405809 - 1406978 | 42278.4 |
| sulfonate transport system permease protein | SAMN05443579_102190 | Not Available | Positive | 1406989 - 1407837 | 30785.3 |
| sulfonate transport system substrate-binding protein | SAMN05443579_102191 | Not Available | Positive | 1407848 - 1408834 | 34819.0 |
| sulfonate transport system atp-binding protein | SAMN05443579_102192 | Not Available | Positive | 1408836 - 1409681 | 31064.6 |
| o-acetylhomoserine sulfhydrylase | SAMN05443579_102193 | Not Available | Positive | 1409713 - 1411002 | 46000.4 |
| 3-hydroxypropanoate dehydrogenase | SAMN05443579_102194 | Not Available | Positive | 1411023 - 1411619 | 21605.6 |
| molybdenum-pterin binding domain-containing protein | SAMN05443579_102195 | Not Available | Positive | 1411680 - 1411895 | 7741.44 |
| protein of unknown function | SAMN05443579_102196 | Not Available | Negative | 1411971 - 1412702 | 26707.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
