Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05443579_101117 | Not Available | Positive | 123081 - 123983 | 31779.0 |
| feruloyl esterase | SAMN05443579_101118 | Not Available | Positive | 124121 - 125899 | 61189.7 |
| dna-3-methyladenine glycosylase i | SAMN05443579_101119 | Not Available | Negative | 125919 - 126569 | 24132.7 |
| acetylornithine deacetylase | SAMN05443579_101120 | Not Available | Negative | 126625 - 127761 | 40347.3 |
| ala-trna(pro) hydrolase | SAMN05443579_101121 | Not Available | Negative | 127769 - 128494 | 26336.5 |
| eama-like transporter family protein | SAMN05443579_101122 | Not Available | Negative | 128519 - 129415 | 31331.5 |
| arac-type dna-binding protein | SAMN05443579_101123 | Not Available | Negative | 129505 - 130344 | 30845.8 |
| hemolysin activation/secretion protein | SAMN05443579_101124 | Not Available | Negative | 130405 - 132144 | 63084.6 |
| hypothetical protein | SAMN05443579_101125 | Not Available | Negative | 132156 - 132764 | 21041.9 |
| immunity protein 49 | SAMN05443579_101126 | Not Available | Negative | 132886 - 133131 | 9434.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
