Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase | SAMN05443579_102157 | Not Available | Negative | 1374540 - 1375331 | 28095.2 |
| diaminopropionate ammonia-lyase | SAMN05443579_102158 | Not Available | Negative | 1375363 - 1376592 | 43568.9 |
| hippurate hydrolase | SAMN05443579_102159 | Not Available | Negative | 1376624 - 1377805 | 41915.0 |
| transcriptional regulator, asnc family | SAMN05443579_102160 | Not Available | Positive | 1377903 - 1378394 | 18250.2 |
| ubiquinone biosynthesis monooxygenase coq7 | SAMN05443579_102161 | Not Available | Positive | 1378391 - 1378918 | 19407.5 |
| hypothetical protein | SAMN05443579_102162 | Not Available | Positive | 1379056 - 1379922 | 30988.1 |
| predicted oxidoreductase | SAMN05443579_102163 | Not Available | Positive | 1380027 - 1381055 | 37362.4 |
| dna-binding transcriptional regulator, lysr family | SAMN05443579_102164 | Not Available | Negative | 1381062 - 1381961 | 33619.1 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05443579_102165 | Not Available | Positive | 1382168 - 1383331 | 40837.0 |
| ornithine cyclodeaminase/1-piperideine-2-carboxylate/1-pyrroline-2- carboxylate reductase | SAMN05443579_102166 | Not Available | Positive | 1383342 - 1384241 | 31157.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
