Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | SAMN05443579_10296 | Not Available | Positive | 1310333 - 1311871 | 55133.4 |
| murein-dd-endopeptidase. serine peptidase. merops family s11 | SAMN05443579_10297 | Not Available | Positive | 1311989 - 1313173 | 42345.0 |
| transcriptional regulator, iclr family | SAMN05443579_10298 | Not Available | Negative | 1313286 - 1314137 | 30438.6 |
| arginine-trna-protein transferase | SAMN05443579_10299 | Not Available | Negative | 1314168 - 1314917 | 28629.2 |
| leucyl/phenylalanyl-trna--protein transferase | SAMN05443579_102100 | Not Available | Negative | 1314914 - 1315669 | 27575.0 |
| carbon-monoxide dehydrogenase large subunit | SAMN05443579_102101 | Not Available | Positive | 1315928 - 1318237 | 81165.6 |
| arac-type dna-binding protein | SAMN05443579_102102 | Not Available | Positive | 1318275 - 1319192 | 32998.1 |
| polyketide cyclase / dehydrase and lipid transport | SAMN05443579_102103 | Not Available | Positive | 1319242 - 1319670 | 15616.5 |
| p-hydroxybenzoate 3-monooxygenase | SAMN05443579_102104 | Not Available | Negative | 1319640 - 1320821 | 43637.8 |
| transcriptional regulator, iclr family | SAMN05443579_102105 | Not Available | Positive | 1320952 - 1321722 | 28034.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
