Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diacylglycerol kinase (atp) | SAMN05443579_10286 | Not Available | Negative | 1300431 - 1300838 | 14748.2 |
| uncharacterized membrane protein yckc, rdd family | SAMN05443579_10287 | Not Available | Negative | 1300835 - 1301296 | 17891.2 |
| protein of unknown function | SAMN05443579_10288 | Not Available | Negative | 1301426 - 1302367 | 32522.7 |
| protein of unknown function | SAMN05443579_10289 | Not Available | Negative | 1302473 - 1302904 | 14802.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05443579_10290 | Not Available | Negative | 1302901 - 1303347 | 16713.6 |
| acetolactate synthase, large subunit | SAMN05443579_10291 | Not Available | Positive | 1303764 - 1305548 | 65388.0 |
| acetolactate synthase, small subunit | SAMN05443579_10292 | Not Available | Positive | 1305690 - 1306181 | 18060.0 |
| ketol-acid reductoisomerase | SAMN05443579_10293 | Not Available | Positive | 1306328 - 1307344 | 36638.9 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | SAMN05443579_10294 | Not Available | Positive | 1307528 - 1308352 | 30194.8 |
| 2-isopropylmalate synthase | SAMN05443579_10295 | Not Available | Positive | 1308576 - 1310282 | 62746.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
