Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05443579_101107 | Not Available | Positive | 111441 - 112427 | 34725.2 |
| arylsulfatase a | SAMN05443579_101108 | Not Available | Positive | 112460 - 113788 | 49295.4 |
| gaf domain-containing protein | SAMN05443579_101109 | Not Available | Negative | 113876 - 115900 | 72874.3 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05443579_101110 | Not Available | Positive | 116118 - 116909 | 27848.8 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05443579_101111 | Not Available | Positive | 116959 - 118224 | 44454.9 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05443579_101112 | Not Available | Positive | 118341 - 119282 | 32964.9 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05443579_101113 | Not Available | Positive | 119300 - 120592 | 45018.0 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05443579_101114 | Not Available | Positive | 120589 - 121344 | 27832.7 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05443579_101115 | Not Available | Positive | 121341 - 122060 | 26285.2 |
| uncharacterized conserved protein, duf849 family | SAMN05443579_101116 | Not Available | Positive | 122099 - 123040 | 34362.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
