Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitt/taut family transport system permease protein | SAMN05443579_10236 | Not Available | Positive | 1248219 - 1249058 | 30475.8 |
| kef-type potassium/proton antiporter, cpa2 family | SAMN05443579_10237 | Not Available | Negative | 1249094 - 1250860 | 61927.1 |
| membrane-bound lytic murein transglycosylase d | SAMN05443579_10238 | Not Available | Negative | 1250943 - 1252529 | 57394.5 |
| hydroxyacylglutathione hydrolase | SAMN05443579_10239 | Not Available | Negative | 1252526 - 1253305 | 27853.1 |
| methyltransferase domain-containing protein | SAMN05443579_10240 | Not Available | Positive | 1253325 - 1254089 | 28941.9 |
| ribonuclease hi | SAMN05443579_10241 | Not Available | Positive | 1254133 - 1254582 | 16518.8 |
| arac-type dna-binding protein | SAMN05443579_10242 | Not Available | Positive | 1254739 - 1255674 | 34814.4 |
| hypothetical protein | SAMN05443579_10243 | Not Available | Positive | 1255802 - 1256041 | 8030.46 |
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05443579_10244 | Not Available | Positive | 1256038 - 1257450 | 50134.0 |
| amidase | SAMN05443579_10245 | Not Available | Positive | 1257493 - 1259001 | 53649.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
