Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05443579_1023 | Not Available | Positive | 1213329 - 1213490 | 6013.25 |
| gst-like protein | SAMN05443579_1026 | Not Available | Negative | 1213340 - 1214047 | 26538.9 |
| ubiquitin-hydrolase zn-finger-containing protein | SAMN05443579_1027 | Not Available | Negative | 1214163 - 1214426 | 9735.49 |
| thioredoxin reductase (nadph) | SAMN05443579_1028 | Not Available | Negative | 1214467 - 1216164 | 58551.0 |
| ornithine-acyl[acyl carrier protein] n-acyltransferase | SAMN05443579_1029 | Not Available | Positive | 1216348 - 1217244 | 32563.5 |
| polyphosphate kinase | SAMN05443579_10210 | Not Available | Positive | 1217400 - 1219571 | 81158.5 |
| phosphohistidine phosphatase | SAMN05443579_10211 | Not Available | Positive | 1219591 - 1220058 | 17286.8 |
| ppx/gppa phosphatase | SAMN05443579_10212 | Not Available | Negative | 1220140 - 1221660 | 55257.3 |
| phosphate abc transporter substrate-binding protein, phot family | SAMN05443579_10213 | Not Available | Positive | 1221912 - 1222946 | 36355.2 |
| phosphate abc transporter membrane protein 1, phot family | SAMN05443579_10214 | Not Available | Positive | 1222988 - 1224067 | 37370.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
