Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose-phosphate pyrophosphokinase | SAMN05443579_1011109 | Not Available | Positive | 1207656 - 1208630 | 35069.3 |
| large subunit ribosomal protein l25 | SAMN05443579_1011110 | Not Available | Positive | 1208766 - 1209410 | 23348.2 |
| peptidyl-trna hydrolase | SAMN05443579_1011111 | Not Available | Positive | 1209494 - 1210126 | 22941.7 |
| hypothetical protein | SAMN05443579_1011112 | Not Available | Positive | 1210223 - 1210702 | 17182.9 |
| 4fe-4s binding domain-containing protein | SAMN05443579_1011113 | Not Available | Negative | 1210688 - 1210981 | 10655.8 |
| hypothetical protein | SAMN05443579_1011114 | Not Available | Positive | 1211099 - 1211409 | 10987.7 |
| hypothetical protein | SAMN05443579_1021 | Not Available | Negative | 1211410 - 1211639 | 7975.61 |
| hypothetical protein | SAMN05443579_1022 | Not Available | Negative | 1211739 - 1212152 | 15102.0 |
| Trna-arg | Not Available | Not Available | Positive | 1213109 - 1213185 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 1213227 - 1213303 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
