Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine protein phosphatase prpc | SAMN05443579_1011089 | Not Available | Negative | 1188182 - 1189093 | 32793.1 |
| serine/threonine protein kinase | SAMN05443579_1011090 | Not Available | Negative | 1189143 - 1190150 | 37692.7 |
| tigr00255 family protein | SAMN05443579_1011091 | Not Available | Positive | 1190242 - 1191165 | 33497.3 |
| guanylate kinase | SAMN05443579_1011092 | Not Available | Positive | 1191186 - 1191806 | 22957.3 |
| dna-directed rna polymerase subunit omega | SAMN05443579_1011093 | Not Available | Positive | 1191837 - 1192040 | 7431.29 |
| gtp pyrophosphokinase | SAMN05443579_1011094 | Not Available | Positive | 1192136 - 1194391 | 83120.7 |
| transcription elongation factor greb | SAMN05443579_1011095 | Not Available | Negative | 1194419 - 1194994 | 20820.4 |
| Trna-arg | Not Available | Not Available | Positive | 1195100 - 1195176 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1195247 - 1195323 | Not Available |
| heat-inducible transcription repressor hrca | SAMN05443579_1011098 | Not Available | Negative | 1195363 - 1196370 | 36786.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
