Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tricarballylate dehydrogenase | SAMN05443579_1011069 | Not Available | Negative | 1163058 - 1164539 | 52118.9 |
| aldehyde dehydrogenase (nad+) | SAMN05443579_1011070 | Not Available | Negative | 1164588 - 1166066 | 53034.3 |
| transcriptional regulator, lysr family | SAMN05443579_1011071 | Not Available | Negative | 1166195 - 1167142 | 35039.6 |
| predicted metal-dependent hydrolase, tim-barrel fold | SAMN05443579_1011072 | Not Available | Positive | 1167274 - 1168137 | 30971.8 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05443579_1011073 | Not Available | Positive | 1168160 - 1169152 | 34095.0 |
| fad/fmn-containing dehydrogenase | SAMN05443579_1011074 | Not Available | Positive | 1169173 - 1172241 | 111639.0 |
| transcriptional regulator, lysr family | SAMN05443579_1011075 | Not Available | Positive | 1172295 - 1173179 | 32536.1 |
| agmatine deiminase | SAMN05443579_1011076 | Not Available | Positive | 1173211 - 1174416 | 42804.3 |
| agmatine deiminase | SAMN05443579_1011077 | Not Available | Positive | 1174445 - 1175536 | 39586.9 |
| xanthine dehydrogenase yagr molybdenum-binding subunit | SAMN05443579_1011078 | Not Available | Negative | 1175543 - 1177753 | 77726.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
