Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkylhydroperoxidase family enzyme, contains cxxc motif | SAMN05443579_10187 | Not Available | Positive | 90624 - 91187 | 20930.2 |
| cd2+/zn2+-exporting atpase | SAMN05443579_10188 | Not Available | Negative | 91189 - 93561 | 82102.2 |
| cd(ii)/pb(ii)-responsive transcriptional regulator | SAMN05443579_10189 | Not Available | Positive | 93680 - 94144 | 17076.3 |
| acetoin utilization deacetylase acuc | SAMN05443579_10190 | Not Available | Negative | 94141 - 95163 | 36990.8 |
| nitrate/nitrite transporter nark | SAMN05443579_10191 | Not Available | Negative | 95190 - 96518 | 46737.2 |
| transcriptional regulator, lysr family | SAMN05443579_10192 | Not Available | Positive | 96654 - 97628 | 37118.8 |
| protein of unknown function | SAMN05443579_10193 | Not Available | Negative | 97645 - 98394 | 27613.2 |
| serine o-acetyltransferase | SAMN05443579_10194 | Not Available | Negative | 98396 - 99166 | 27394.0 |
| trna/rrna methyltransferase | SAMN05443579_10195 | Not Available | Negative | 99259 - 99990 | 26462.1 |
| myo-inositol-1(or 4)-monophosphatase | SAMN05443579_10196 | Not Available | Positive | 100185 - 101243 | 37776.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
