Geodermatophilus obscurus strain DSM 43161

Gram-negativeCocciNon-motileAerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus obscurus strain DSM 43161 is a Gram-negative bacterium characterized by its filamentous cell arrangement and cocci shape. This species is classified as a chemoorganotroph, indicating that it derives its energy from organic compounds. It is strictly aerobic, requiring oxygen for growth and survival. G. obscurus is found in unique habitats, specifically within rock varnish in desert environments, where it adapts to the extreme conditions typical of these ecosystems. This organism does not exhibit mobility, as it lacks flagella, and it is free-living, suggesting that it does not depend on other organisms for its survival. The optimal growth temperature for G. obscurus is around 29°C, placing it within the mesophilic temperature range. With a single replicon, this strain demonstrates a simplified genomic structure, which is often associated with organisms adapted to stable environments. The ecological role of G. obscurus in desert habitats is likely significant, as its presence in rock varnish indicates a potential contribution to the biogeochemical cycling of organic materials in these arid ecosystems. Its ability to thrive in such a niche underscores the adaptability of microbial life and its importance in maintaining ecological balance in extreme environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus obscurus
Strainstrain DSM 43161

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Geodermatophilus obscurus strain DSM 43161
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature29
Temperature rangeMesophilic
Habitatrock varnish in deserts
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Geodermatophilus obscurus strain DSM 43161 genome assembly,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4697 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
magnesium transporterSAMN05660359_00756Not AvailableNegative823061 - 82419742132.3
amino acid/polyamine/organocation transporter, apc superfamilySAMN05660359_00757Not AvailablePositive824332 - 82585553413.3
hypothetical proteinSAMN05660359_00758Not AvailablePositive825942 - 82654719737.8
methionyl-trna synthetaseSAMN05660359_00759Not AvailablePositive826572 - 82836866039.3
tatd dnase family proteinSAMN05660359_00760Not AvailablePositive828365 - 82925531256.7
hypothetical proteinSAMN05660359_00761Not AvailablePositive829283 - 83012229269.5
uncharacterized conserved protein yabe, contains g5 and tandem duf348 domainsSAMN05660359_00762Not AvailablePositive830337 - 83154841977.5
dimethyladenosine transferaseSAMN05660359_00763Not AvailablePositive831694 - 83241324927.2
4-diphosphocytidyl-2-c-methyl-d-erythritol kinaseSAMN05660359_00764Not AvailablePositive832439 - 83339831636.7
transcriptional regulator, tetr familySAMN05660359_00765Not AvailableNegative833403 - 83402622669.0

Displaying genes 761 – 770 of 4753 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.