Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerocolumna
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Anaerocolumna |
| Species | Anaerocolumna aminovalerica |
| Strain | strain DSM 1283 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487898 bp
Thymine Count
1517930 bp
Guanine Count
796504 bp
Cytosine Count
821702 bp
Genome Length
4624179 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
105 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted o-methyltransferase yrrm | SAMN04489757_104140 | Not Available | Positive | 879938 - 880594 | 24825.7 |
| putative protease | SAMN04489757_104141 | Not Available | Positive | 880768 - 882003 | 47382.1 |
| s-adenosylmethionine decarboxylase | SAMN04489757_104142 | Not Available | Positive | 882148 - 882960 | 31367.0 |
| arginine decarboxylase | SAMN04489757_104143 | Not Available | Positive | 883209 - 884663 | 53129.5 |
| spermidine synthase | SAMN04489757_104144 | Not Available | Positive | 884749 - 885597 | 32750.9 |
| agmatinase | SAMN04489757_104145 | Not Available | Positive | 885590 - 886435 | 31335.3 |
| carboxynorspermidine dehydrogenase | SAMN04489757_104146 | Not Available | Positive | 886714 - 887913 | 44798.7 |
| carboxynorspermidine decarboxylase | SAMN04489757_104147 | Not Available | Positive | 887923 - 889059 | 43044.7 |
| rna polymerase sigma factor, sigma-70 family | SAMN04489757_104148 | Not Available | Positive | 890083 - 890376 | 10768.1 |
| peptide/nickel transport system substrate-binding protein | SAMN04489757_104149 | Not Available | Positive | 890651 - 892315 | 61028.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
