Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | SAMN05421854_101950 | Not Available | Negative | 941908 - 942231 | 11684.3 |
| thioredoxin reductase (nadph) | SAMN05421854_101951 | Not Available | Negative | 942260 - 943252 | 35366.5 |
| hypothetical protein | SAMN05421854_101952 | Not Available | Negative | 943347 - 944144 | 26400.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421854_101953 | Not Available | Negative | 944141 - 944707 | 20440.2 |
| hypothetical protein | SAMN05421854_101954 | Not Available | Negative | 944838 - 946436 | 55184.9 |
| putative peptidoglycan lipid ii flippase | SAMN05421854_101955 | Not Available | Negative | 946516 - 948294 | 63034.9 |
| hypothetical protein | SAMN05421854_101956 | Not Available | Negative | 949009 - 951171 | 73664.7 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN05421854_101957 | Not Available | Negative | 951186 - 951692 | 18814.3 |
| poly(a) polymerase | SAMN05421854_101958 | Not Available | Positive | 951794 - 953251 | 53667.1 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05421854_101959 | Not Available | Positive | 953393 - 954718 | 46987.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
