Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421854_101940 | Not Available | Positive | 931012 - 931338 | 12185.5 |
| yidc/oxa1 family membrane protein insertase | SAMN05421854_101941 | Not Available | Positive | 931343 - 932488 | 41661.6 |
| spoiiij-associated protein | SAMN05421854_101942 | Not Available | Positive | 932517 - 933056 | 19535.7 |
| 16s rrna (guanine527-n7)-methyltransferase | SAMN05421854_101943 | Not Available | Positive | 933677 - 934357 | 24120.3 |
| chromosome partitioning protein | SAMN05421854_101944 | Not Available | Positive | 934444 - 935367 | 32764.0 |
| chromosome partitioning protein, parb family | SAMN05421854_101945 | Not Available | Positive | 935364 - 936383 | 36655.7 |
| d-alanine-d-alanine ligase | SAMN05421854_101946 | Not Available | Negative | 936515 - 937465 | 33345.6 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN05421854_101947 | Not Available | Negative | 937496 - 938815 | 47874.4 |
| fr47-like protein | SAMN05421854_101948 | Not Available | Positive | 938997 - 939641 | 23350.0 |
| n-acetylmuramoyl-l-alanine amidase | SAMN05421854_101949 | Not Available | Negative | 940491 - 941639 | 41691.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
