Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421854_101910 | Not Available | Positive | 900088 - 900729 | 22348.1 |
| hypothetical protein | SAMN05421854_101911 | Not Available | Negative | 900793 - 901362 | 20404.1 |
| protein of unknown function | SAMN05421854_101912 | Not Available | Negative | 901385 - 901912 | 18034.4 |
| hypothetical protein | SAMN05421854_101913 | Not Available | Positive | 901969 - 902679 | 24463.2 |
| pyridoxamine 5'-phosphate oxidase | SAMN05421854_101914 | Not Available | Positive | 902681 - 903319 | 23484.3 |
| hypothetical protein | SAMN05421854_101915 | Not Available | Negative | 903316 - 904257 | 33716.8 |
| arac-type dna-binding protein | SAMN05421854_101916 | Not Available | Positive | 904308 - 904751 | 16669.9 |
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN05421854_101917 | Not Available | Positive | 904762 - 905172 | 15075.8 |
| excinuclease uvrabc atpase subunit | SAMN05421854_101918 | Not Available | Positive | 905213 - 907597 | 84931.8 |
| amidase | SAMN05421854_101919 | Not Available | Negative | 907594 - 909003 | 49628.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
