Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system atp-binding protein | SAMN05421854_101900 | Not Available | Positive | 892545 - 893252 | 25385.6 |
| abc-2 type transport system permease protein | SAMN05421854_101901 | Not Available | Positive | 893266 - 893991 | 25210.2 |
| hypothetical protein | SAMN05421854_101902 | Not Available | Positive | 894084 - 894470 | 13978.3 |
| luciferase-like monooxygenase | SAMN05421854_101903 | Not Available | Negative | 894853 - 895866 | 35387.3 |
| hypothetical protein | SAMN05421854_101904 | Not Available | Negative | 895836 - 895994 | 5999.63 |
| lpxtg-site transpeptidase (sortase) family protein | SAMN05421854_101905 | Not Available | Negative | 895994 - 896947 | 34130.5 |
| uncharacterised protein family (upf0233) | SAMN05421854_101906 | Not Available | Positive | 897588 - 897854 | 9894.54 |
| ph domain-containing protein | SAMN05421854_101907 | Not Available | Positive | 897940 - 898368 | 15283.4 |
| membrane associated serine protease, rhomboid family | SAMN05421854_101908 | Not Available | Negative | 898354 - 899313 | 34290.9 |
| peptidyl-prolyl cis-trans isomerase a (cyclophilin a) | SAMN05421854_101909 | Not Available | Negative | 899357 - 899881 | 18474.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
