Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglucosamine mutase | SAMN05421854_10151 | Not Available | Negative | 50979 - 52316 | 44955.9 |
| small subunit ribosomal protein s9 | SAMN05421854_10152 | Not Available | Negative | 52563 - 53066 | 17988.4 |
| lsu ribosomal protein l13p | SAMN05421854_10153 | Not Available | Negative | 53063 - 53515 | 16608.2 |
| hypothetical protein | SAMN05421854_10154 | Not Available | Positive | 53806 - 54672 | 30932.7 |
| protein of unknown function | SAMN05421854_10155 | Not Available | Positive | 54713 - 55429 | 25231.2 |
| wxg100 family type vii secretion target | SAMN05421854_10156 | Not Available | Negative | 55610 - 55900 | 10665.3 |
| wxg100 family type vii secretion target | SAMN05421854_10157 | Not Available | Negative | 55963 - 56286 | 11570.4 |
| hypothetical protein | SAMN05421854_10158 | Not Available | Negative | 56528 - 56887 | 13211.5 |
| type vii secretion-associated protein, rv3446c family, c-terminal domain-containing protein | SAMN05421854_10159 | Not Available | Negative | 56902 - 58929 | 71452.7 |
| dna segregation atpase ftsk/spoiiie, s-dna-t family | SAMN05421854_10160 | Not Available | Negative | 58970 - 62986 | 146899.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
