Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tir domain-containing protein | SAMN05421854_101850 | Not Available | Positive | 842417 - 844099 | 60727.5 |
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05421854_101851 | Not Available | Negative | 844092 - 845477 | 47717.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421854_101852 | Not Available | Negative | 845493 - 846251 | 26054.9 |
| acyl-coa reductase | SAMN05421854_101853 | Not Available | Negative | 846248 - 847672 | 49603.4 |
| peptide/nickel transport system atp-binding protein | SAMN05421854_101854 | Not Available | Negative | 847665 - 848432 | 28129.0 |
| abc-type dipeptide/oligopeptide/nickel transport system, atpase component | SAMN05421854_101855 | Not Available | Negative | 848429 - 849163 | 26062.8 |
| peptide/nickel transport system permease protein | SAMN05421854_101856 | Not Available | Negative | 849160 - 849975 | 28422.4 |
| peptide/nickel transport system permease protein | SAMN05421854_101857 | Not Available | Negative | 849975 - 850919 | 33213.6 |
| peptide/nickel transport system substrate-binding protein | SAMN05421854_101858 | Not Available | Negative | 850916 - 852406 | 54230.6 |
| dna-binding transcriptional regulator, fadr family | SAMN05421854_101859 | Not Available | Positive | 852483 - 853220 | 26974.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
