Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN05421854_101840 | Not Available | Positive | 833430 - 834056 | 23414.0 |
| d-serine deaminase, pyridoxal phosphate-dependent | SAMN05421854_101841 | Not Available | Negative | 834061 - 835248 | 42378.6 |
| fad-linked oxidoreductase | SAMN05421854_101842 | Not Available | Positive | 835349 - 836650 | 47098.8 |
| ribose-phosphate pyrophosphokinase | SAMN05421854_101843 | Not Available | Negative | 836651 - 837595 | 34346.5 |
| putative nadh-flavin reductase | SAMN05421854_101844 | Not Available | Negative | 837595 - 838245 | 22620.8 |
| hypothetical protein | SAMN05421854_101845 | Not Available | Negative | 838287 - 838949 | 23466.1 |
| beta-methylmalyl-coa/l-malyl-coa lyase | SAMN05421854_101846 | Not Available | Positive | 839369 - 840439 | 38569.3 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN05421854_101847 | Not Available | Positive | 840436 - 841296 | 30617.5 |
| hypothetical protein | SAMN05421854_101848 | Not Available | Negative | 841328 - 841912 | 21329.7 |
| hypothetical protein | SAMN05421854_101849 | Not Available | Negative | 841912 - 842367 | 16993.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
