Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative copper resistance protein d | SAMN05421854_101830 | Not Available | Positive | 819464 - 820492 | 35718.1 |
| phosphotransferase enzyme family protein | SAMN05421854_101831 | Not Available | Negative | 820663 - 821553 | 32588.3 |
| transcriptional regulator, contains xre-family hth domain | SAMN05421854_101832 | Not Available | Negative | 821570 - 822976 | 50732.1 |
| hypothetical protein | SAMN05421854_101833 | Not Available | Positive | 823299 - 823655 | 12196.4 |
| hypothetical protein | SAMN05421854_101834 | Not Available | Positive | 823670 - 824092 | 15259.2 |
| rhs repeat-associated core domain-containing protein | SAMN05421854_101835 | Not Available | Positive | 824634 - 829832 | 189798.0 |
| 4-carboxymuconolactone decarboxylase | SAMN05421854_101836 | Not Available | Negative | 829875 - 830291 | 14693.4 |
| merr, dna binding | SAMN05421854_101837 | Not Available | Negative | 830288 - 830515 | 8662.58 |
| major facilitator superfamily protein | SAMN05421854_101838 | Not Available | Negative | 830708 - 831967 | 43728.7 |
| beta-glucosidase | SAMN05421854_101839 | Not Available | Negative | 831960 - 833282 | 48693.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
